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叶国友课题组

来源: 发布者: 时间:2020年02月10日

  叶国友课题组

  Ye Guoyou Lab

 

  课题组长

  叶国友,高级科学家,博士生导师。现任作物组学大数据及应用创新团队首席,CAAS-IRRI联合实验室主任和IRRI驻中国代表。多年来一直从事植物遗传育种相关研究,在群体改良、分子育种、育种方案设计、遗传分析和遗传育种软件开发等方面有重要建树。在国际刊物发表研究论文60多篇,参与编写论著1部。

 

  工作经历

  2016.4-至今           中国农业科学院深圳农业基因组研究所/国际水稻研究所    高级科学家/CAAS-IRRI联合实验室主任

  2009.1-2016.4       国际水稻研究所                                                               高级科学家 

  2005.7-2009.7       澳大利亚维多利亚洲初级产业部                                       高级科学家   

  2005.7-2009.7       昆士兰大学                                                                      研究人员     

  2000.10-2001.7     新西兰作物和食品研究中心                                              研究人员   

  1990.12-1995.2     林业部泡桐研究开发中心                                                 研究人员   

      

  教育经历

  1997.03-2001.04      林肯大学                       博士              

  1986.08-1989.06     北京林业大学                 硕士                

  1982.08-1986.06     北京林业大学                 本科   

             

  团队研究方向

  以水稻为目标作物建立全基因组水平选择与设计育种的信息管理,数据分析和育种设计平台。

 

  研究进展

  引进国际水稻种质7000多份,在水稻耐盐性、离子营养积累/毒害,直播相关性状的遗传和育种等方面取得重要进展:完成了aus、indica群体苗期耐盐表型的测定工作;通过全基因组关联分析和反向遗传学的方法已经找到2个与耐盐相关的基因;定位到8个与籽粒镉累积相关的功能位点,获得12个候选基因;已经获得多个与镉累积相关的遗传群体;对多个候选基因进行了克隆;与IRRI合作获得了3个与籽粒锌累积相关的候选基因;获得 4个与水稻铝吸收转运的候选基因;对1000多份重测序种质进行中胚轴长度测定;通过关联分析定位到7个与中胚轴发育相关的功能位点,获得了15个候选基因;获得35个F1群体,26个F2群体。

 

 

  PI

  Guoyou Ye, research professor, doctoral supervisor. At present, he is the chief of Big Data and Application of Crop Omics Innovation Team, the director of CAAS-IRRI Joint Laboratory and the IRRI's representative in China. He has been working on quantitative plant breeding since 1989. And He is successful in biostatistics, quantitative genetic analysis, population improvement, designing efficient conventional and molecular breeding strategies and developing simulation/prediction tools for breeding.

 

  Working Experience

  2016.4–Present       Agricultural Genomics Institute at Shenzhen-CAAS / International Rice Research Institute      Senior Scientist /Director of CAAS-IRRI joint laboratory     

  2009.01-2016.04    International Rice Research Institute                                                                                             Senior Scientist  

  2005.07-2009.07    The Department of Primary Industries, Victoria, Australia                                                           Senior Scientist 

  2001.07-2005.07    The University of Queensland                                                                                                       Research Officer/Fellow                  

  2000.10-2001.07    New Zealand Institute for Crop & Food Research                                                                        Research Fellow     

  1990.12-1995.02    Paulownia Research Centre of China                                                                                            Director and Senior Scientist          

  

  Education Experience

  1997.03-2001.04        Lincoln University, Lincoln, New Zealand       Ph.D     

  1986.08-1989.06        Beijing Forestry University                               Master   

  1982.08-1986.06        Beijing Forestry University                               Bachelor   

 

  Research Interest

  With rice as the target crop, established the information management, data analysis and breeding design platform for genome level selection and design breeding.

 

  Major Achievements

  More than 7000 international rice germplasm have been introduced. Significant genetic progress has been made in rice salt tolerance, ion nutrition accumulation / toxicity, and direct seeding related traits. Phenotyping of salt tolerance in Aus and indica populations at seedling stage has been completed. Two genes related to salt tolerance have been identified through genome-wide association analysis and reverse genetics. Eight functional loci related to cadmium accumulation in grains have been located, and 12 candidate genes have been identified in these regions, in which many of them have been cloned. Many F2 populations related to cadmium accumulation used for linkage mapping have been obtained. Three candidate genes related to grain zinc accumulation and 4 candidate genes related to aluminum absorption and transport in rice were obtained. More than 1000 resequenced germplasms have been tested for mesocotyl length; 7 functional loci and 15 candidate genes related to mesocotyl development have been identified, Thirty-five F1 populations and twenty-six F2 populations used for linkage mapping were obtained.

 

  Selected Publication

  1. Zou W.L., Li C., Zhu Y.J., Chen J.G., He H.H et al (2019). Rice Heavy Metal P-type ATPase OsHMA6 Is Likely a Copper Efflux Protein. Rice Science 27

  2. Chen J.G., Zou W.L., Meng L.J., Fan X.Y., Xu G.H. et al (2019). Advances in the Uptake and Transport Mechanisms and QTLs Mapping of Cadmium in Rice. International Journal of Molecular Sciences 20:3417-3433

  3. Liu H.Y., Zhan J.H., Li J.L., Lu X., Liu J.D. et al (2019). Genome‐wide Association Study (GWAS) for Mesocotyl Elongation in Rice (Oryza sativa L.) under Multiple Culture Conditions. Genes 11

  4. Zhan J., Lu X., Liu H., Zhao Q.J., Ye G.Y(2019). Mesocotyl Elongation, an Essential Trait for Dry Seeded Rice (Oryza sativa L.): A Review of Physiological and Genetic Basis. Planta 251:27

  5. Luo, B., Chen, J., Zhu, L., Liu, Sh., Lu, H. et al (2018). Affinity Nitrate Transporter OsNRT2.1 Increases Yield and Manganese Accumulation in Rice Under Alternating Wet and Dry Condition. Frontiers in Plant Science 9:1192.

  6. Liang, Y., Meng, L., Lin, X. Cui, Y., Pang, Y. et al (2018).QTL and QTL networks for cold tolerance at the reproductive stage detected using selective introgression in rice. PlOS ONE 13(9): e0200846.

  7. Liu, H., Wang, W., He, A., Nie, L. (2018).uring Ripening in Dry Seeded and Transplanted Rice. rice science 25:279.

  8. 邹文莉、冷语佳、李娇龙、孟丽君、叶国友、贺浩华和陈景光(2018).水稻镉积累的吸收与转运机制及镉胁迫相关 QTL定位的研究. 分子植物育种 16(24):1.

  9. Meng,L., Wang,B., Zhao,X., Ponce,K., Qian,Q., Ye,G.(2017).Association mapping of Ferrous, Zinc, and Aluminum tolerance at the seedling stage in Indica rice using MAGIC populations.Frontiers in Plant Science 8:1-15.

  10. Leng Y., Ye G., Zeng D.(2017).Genetic dissection of leaf senescence in rice.International Journal of Molecular Sciences 18:2686.

  11. Liang,S., Wu,L., Ren,G., Zhao,X., Zhou,M., McNeil,D., Ye,G.(2016).Genome-wide association study of grain yield and related traits using a collection of advanced indica rice breeding lines for irrigated ecosystems.Field Crops Research 193:70-86.

  12. Meng,L., Guo,L., Ponce,K., Zhao,X., Ye,G.(2016).Characterization of three indica rice multiparent advanced generation intercross (MAGIC) populations for QTL identification.

  13. The Plant Genome 9:1-14.Meng,L., Zhao,X., Ponce,K., Ye,G., Leung,H.(2016).

  14. QTL mapping for agronomic traits using multi-parent advancedgeneration inter-cross (MAGIC) populations derived from diverse eliteindica rice lines.Field Crops Research 189: 19-42.

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